SE0830026

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11655
  • Thellungiella salsuginea
  • SE0830026
  • hAT
  • Hat6
  • Scaffold_2331:42131-42298
  • CACAGAGA
  • CAGGGCCGGATCT

Secondary structure and sequence

TSD    TIR
5'



3' 
CACAGAGA             GAGAA     GAGCTAGAAACAATTTAAGAACAAATATATTTTTGTGATTTGGGGGCTGAAAAAT
        CAGGGCCGGATCT     TTTGG                                                       
        |||||||||||||     |||||                                                       T
        GTCCCGGCCTAGA     CCCCT                                                       
AGAGACAC             -----     GTCGGACTACTTTGTAGGCAGATATCGTGGGTTTTAAAAAGAAACCAATAAATGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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