SE0830059

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11688
  • Thellungiella salsuginea
  • SE0830059
  • hAT
  • Hat18
  • Scaffold_8717:43130-43334
  • GGTATAAG
  • TATA

Secondary structure and sequence

TSD    TIR
5'



3' 
GG    AGTAT        --------GCA   A   -       CGGGGTTGAGGAAAACATCCAACATAAAATTAGGGGGGTCAATCGAATAATTTTCAACAAAT
  TATA     TGGCGGAG           GGA TTT TTTTAAC                                                              
  ||||     ||||||||           ||| ||| |||||||                                                              T
  ATAT     ACCGCCTC           TAA TCC CCAGTTA                                                              
GA    GGGTC        GATGAACCTGA   -   A       ACTGGGTCCAGTTCGATATTGTTACTTTTGAATTCGAATGATTACGTAGAATAAAGATTTTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3