SE1220002

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11725
  • Citrullus lanatus
  • SE1220002
  • Mutator
  • M1
  • scaffold83:2299134-2299298
  • TTAATTTAA
  • G

Secondary structure and sequence

TSD    TIR
5'



3' 
                               TTAATTTAA       -   CAAATATAGCAAAAGGAACCTAAATATTAACAAATATAGCAAAATTT
                                        GGGTTCT TTT                                               
                                        ||||||| |||                                               C
                                        TTTATAA TGT                                               
AATTTAATTTCTTTTAATATAATTTACTGTTTTGACAACT       A   TGATTATCGTTTTATGTGTCAGATAGACACTATCTAGGGTTTTATCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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