SE1220022

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11745
  • Citrullus lanatus
  • SE1220022
  • Mutator
  • M4
  • scaffold104:1513905-1514060
  • TTTATATTT
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
        TTTATA   G       A    AAATAAAAAAATTGCTGAAAATATTTTTAAATATAACAAAATGTCATTGTCTA
              TTT AGTAGTT TTTT                                                     
              ||| ||||||| ||||                                                      
              AAA AGTTTAT ATTG                                                     
TTATATTTACCTAC   -       -    TTTTATTTAATTGAATAAATGTTTATATCATTTTACAGTAACAGATAGTGCCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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