SE1220053

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_11776
  • Citrullus lanatus
  • SE1220053
  • Mutator
  • M2
  • scaffold1911:126766-126943
  • AAAGATTTA
  • A

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAGATTTAAGAAAATTATTATAAAAAGAAAAAATATC    --     ATAAATATAGAAATTTTTTACCGTCTATCACTTAAGCGATAGAAGTCTATCGCTGAT
                                      AAAT  TATTT                                                         
                                      ||||  |||||                                                          
                                      AAAC  TATAA                                                         
                                ATTTAG    TC     AAGTTTATATCGTTTTACTCAATTTGATAAATGTTTATATCTTTTCAAAATGACAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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